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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11154155_11154788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11154155 - 11154788

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTATCCTTATTT

Flanking Amino Acid:

SKTRDSSGFNRPCLSKSCFS

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.2

37.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

89.8

0.89

0.7

88.1

29.1

Minor 5ss

45.8

-0.4

2.9

65.2

Minor BPS

69.8

0.7

1.6

81.82

39.7

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633