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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11155539_11155641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11155539 - 11155641

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

CTGTGTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ACTTACAGAATT

Flanking Amino Acid:

TFLDTTSGHTVDDVYNFNIS

Intron Amino Acid Position:

776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

74.7

41.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

69.3

0.43

1.1

64.5

41.5

Minor 5ss

39.4

-1.2

2.9

52.3

44.3

Minor BPS

48.6

-0

1.9

69.53

41.1

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633