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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11155694_11156382_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11155694 - 11156382

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGTA

5'SS Class:

strong_major

3'SS Sequence:

TTATGTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTGTCATTTATT

Flanking Amino Acid:

ISGFDEPTIKIQDCHVKEQN

Intron Amino Acid Position:

794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.1

38.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.6

0.73

0.8

81.4

36.1

Minor 5ss

31.4

-2.1

3.9

45.7

49.5

Minor BPS

60.6

0.41

1.9

81.12

40.6

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633