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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11156439_11156983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11156439 - 11156983

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGAGATG

5'SS Class:

major

3'SS Sequence:

TTTTTTTATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCA

Flanking Amino Acid:

QNVRTDPKKKGNPDEIKTST

Intron Amino Acid Position:

812

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.2

57.6

46.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.5

0.66

36.9

Minor 5ss

33.4

-1.9

3.6

38.8

46.8

Minor BPS

71.9

0.68

1.5

82.41

32.7

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633