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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11157766_11158624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11157766 - 11158624

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTTTTGTTATTC

Flanking Amino Acid:

SKGKTAKKKKETECKKQAPR

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

83.9

27.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

71.8

0.49

1.1

72.2

37.9

Minor 5ss

35.6

-1.6

3.4

47.2

Minor BPS

53.4

0.09

2.2

73.26

38.6

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633