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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11162530_11163124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11162530 - 11163124

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

AATGTCTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAATGTTAAAAT

Flanking Amino Acid:

FQKEFTKKMESRSQKMDHFT

Intron Amino Acid Position:

1293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.9

74.7

41.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

77.1

0.61

0.9

69.4

40.9

Minor 5ss

23.3

-3.1

3.9

38.3

46.6

Minor BPS

47.2

-0.1

2.1

43.6

Associated Gene:

Gene:

SYCP2

Ensembl Gene ID:

ENSAPLG00000014080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014689

11137957 - 11165589

27633