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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11173555_11177803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11173555 - 11177803

Intron Length:

4249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

ATATTCTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

EELERRNILKQRNDQTEQEE

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.2

80.5

33.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.4

0.57

0.9

67.4

39.5

Minor 5ss

34.3

-1.8

2.8

43.1

36.9

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

PHACTR3

Ensembl Gene ID:

ENSAPLG00000014492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015130

11168723 - 11273176

104454