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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11196981_11201920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11196981 - 11201920

Intron Length:

4940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCCATGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCCTTTTCAATC

Flanking Amino Acid:

EEVLNDSIISGTLPRKCKKE

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

76.6

33.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.32

54.1

40.6

Minor 5ss

31.7

-2.1

3.1

36.4

Minor BPS

55.1

0.14

1.5

61.08

39.5

Associated Gene:

Gene:

PHACTR3

Ensembl Gene ID:

ENSAPLG00000014492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015130

11168723 - 11273176

104454