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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11203413_11206971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11203413 - 11206971

Intron Length:

3559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

ATTGTATGACCT

Flanking Amino Acid:

AISKITKSLTGSDTDDPAMK

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

1.2

Major BPS

79.1

0.72

69.3

38.4

Major PPT

72.4

0.5

67.4

39.1

Minor 5ss

32.8

-2

2.7

42.5

44.3

Minor BPS

45.6

-0.2

67.9

42.8

Associated Gene:

Gene:

PHACTR3

Ensembl Gene ID:

ENSAPLG00000014492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015130

11168723 - 11273176

104454