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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11387962_11388866_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11387962 - 11388866

Intron Length:
905

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGATTA

5'SS Class:
strong_major

3'SS Sequence:
ATATTCTCAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
ATATTCTCAACA

Flanking Amino Acid:
SFSQGQQIQELSSAAAGGAF

Intron Amino Acid Position:
1411

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.4
0.79
1
77.8
33.3

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
72.1
0.5
1
67.2
38.4

Minor 5ss
40.1
-1.1
3.4
55.5
48.7

Minor BPS
67.8
0.56
1.5
74.94
36

Associated Gene:

Gene:
ZNF831

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11382097 - 11401746
19650

11384538 - 11401746
17209