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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11424688_11425347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11424688 - 11425347

Intron Length:

660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTGTAACCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTTTTTGTAACC

Flanking Amino Acid:

ANTISSNANKGREALEWVIN

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

78.2

0.7

77.9

32.1

Major PPT

70.4

0.46

0.9

37.9

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

65.9

0.48

81.25

33.5

Associated Gene:

Gene:

PRELID3B

Ensembl Gene ID:

ENSAPLG00000014562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028677

11421246 - 11425469

4224

ENSAPLT00000015188

11366394 - 11425467

59074