Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_11465203_11465656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11465203 - 11465656

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCGCC

5'SS Class:

major

3'SS Sequence:

GTTATTCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGTTATTCATCT

Flanking Amino Acid:

AQEVQRYAHEKGHDASQITL

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.5

38.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

71.3

0.48

63.4

43.1

Minor 5ss

39.3

-1.2

3.3

51.6

39.4

Minor BPS

49.6

0.05

74.14

42.4

Associated Gene:

Gene:

NELFCD

Ensembl Gene ID:

ENSAPLG00000014867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015522

11460431 - 11469590

9160