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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11568452_11572264_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11568452 - 11572264

Intron Length:
3813

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAAGGGGG

5'SS Class:
major

3'SS Sequence:
TTTCATTTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTGAT

U12 Branch Point Sequence:
TCCTTCTGAATT

Flanking Amino Acid:
YRATHRLLLLGAGESGKSTI

Intron Amino Acid Position:
47

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
58.7
46.2

Major BPS
87.6
0.93
0.8
77.4
37.3

Major PPT
84.3
0.77
0.7
77.4
36.6

Minor 5ss
28.2
-2.5
3.4
29.1
43.5

Minor BPS
65.2
0.56
1.4
75.82
41.6

Associated Gene:

Gene:
GNAS

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11479433 - 11572403
92971