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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11711424_11716585_R

Intron Information:

Intron Rank:

152009

Intron Class:

major

Intron Phase:

Intron Coordinates:

11711424 - 11716585

Intron Length:

5162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACACCAT

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

47.7

-0.1

1.3

54.8

40.3

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023154

11710353 - 11724025

13673