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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11770666_11782773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11770666 - 11782773

Intron Length:

12108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CGGCCCTTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

TCGCCCCCATTT

Flanking Amino Acid:

RCWWLAGLLLACAAAEPPLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

48.9

-0

1.3

39.1

Major PPT

67.7

0.4

0.9

60.8

35.1

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

42.5

-0.4

58.29

44.8

Associated Gene:

Gene:

APCDD1L

Ensembl Gene ID:

ENSAPLG00000002562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002572

11770426 - 11786808

16383