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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11783955_11786043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11783955 - 11786043

Intron Length:

2089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTACAAAAATA

Flanking Amino Acid:

GYQRPLQNAVHHVHPCPACG

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

73.5

0.59

81.3

29.9

Major PPT

81.3

0.71

0.8

77.1

31.6

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

46.4

-0.2

2.1

66.43

39.8

Associated Gene:

Gene:

APCDD1L

Ensembl Gene ID:

ENSAPLG00000002562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002572

11770426 - 11786808

16383