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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11852787_11852919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11852787 - 11852919

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCCCAC

U12 Branch Point Sequence:

TTTTTGTTTTCT

Flanking Amino Acid:

MAGIPLYFVDLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

67.4

Major BPS

46.4

-0.2

1.2

52.1

34.1

Major PPT

84.9

0.79

0.7

80.8

31.2

Minor 5ss

32.6

-2

3.2

45.3

Minor BPS

39.9

-0.7

3.9

79.16

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002724

11852780 - 11875264

22485