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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11852965_11859909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11852965 - 11859909

Intron Length:

6945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

CTTGTCTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

CTTTTGTTACTC

Flanking Amino Acid:

FVDLQDDLDDFGFEDYGPDC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

72.2

32.2

Major BPS

71.4

0.53

1.2

63.4

Major PPT

73.6

0.53

71.4

38.6

Minor 5ss

33.2

-1.9

2.8

42.6

38.5

Minor BPS

48.4

-0.1

2.3

64.76

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044842

11852766 - 11875264

22499

ENSAPLT00000034832

11852766 - 11879626

26861

ENSAPLT00000002724

11852780 - 11875264

22485