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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11863000_11864122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11863000 - 11864122

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGTG

5'SS Class:

major

3'SS Sequence:

GTTTTTTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTATTCATGATG

Flanking Amino Acid:

SDGKLFQVRKICAANFGDIC

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

68.2

42.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.9

0.78

0.7

84.8

Minor 5ss

31.3

-2.1

3.3

40.4

45.9

Minor BPS

54.9

0.01

1.7

63.58

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044842

11852766 - 11875264

22499

ENSAPLT00000034832

11852766 - 11879626

26861

ENSAPLT00000002724

11852780 - 11875264

22485