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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11864189_11864730_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11864189 - 11864730

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAGTTTTTAATT

Flanking Amino Acid:

VGQEATERLLIPKFFELCSD

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.3

0.73

80.8

36.6

Minor 5ss

33.8

-1.8

38.1

42.1

Minor BPS

0.8

1.1

80.11

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044842

11852766 - 11875264

22499

ENSAPLT00000034832

11852766 - 11879626

26861

ENSAPLT00000002724

11852780 - 11875264

22485