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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11866327_11867766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11866327 - 11867766

Intron Length:

1440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTATAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TGCTTTATAACA

Flanking Amino Acid:

QEHIDDPDVQAQVQVLSAAL

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

74.4

0.55

70.1

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

58.8

0.27

1.6

68.26

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044842

11852766 - 11875264

22499

ENSAPLT00000034832

11852766 - 11879626

26861

ENSAPLT00000002724

11852780 - 11875264

22485