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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11869847_11870196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11869847 - 11870196

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

AAATTGTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TCTTCTTAAATT

Flanking Amino Acid:

TYETLASDVQWKVRRTLAFS

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

82.2

0.8

71.9

35.8

Major PPT

73.4

0.53

66.2

44.1

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

69.1

0.68

1.6

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044842

11852766 - 11875264

22499

ENSAPLT00000034832

11852766 - 11879626

26861

ENSAPLT00000002724

11852780 - 11875264

22485