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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11870359_11870445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11870359 - 11870445

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ATTTGATCAGCT

Flanking Amino Acid:

VLKHLYDFLKLLHADKRREY

Intron Amino Acid Position:

741

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

83.7

0.76

0.7

82.3

29.8

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

45.4

-0.2

2.3

72.25

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044842

11852766 - 11875264

22499

ENSAPLT00000034832

11852766 - 11879626

26861

ENSAPLT00000002724

11852780 - 11875264

22485