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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11872584_11873316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11872584 - 11873316

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGAGCA

5'SS Class:

major

3'SS Sequence:

CCCTATTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

ATGTCCCTATTC

Flanking Amino Acid:

GRQAFAFICQAVVEEECMPV

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.2

60.8

38.2

Major BPS

0.87

0.8

85.6

Major PPT

74.1

0.54

0.8

68.9

31.3

Minor 5ss

25.7

-2.8

3.2

31.1

42.5

Minor BPS

51.5

0.03

1.9

65.4

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002724

11852780 - 11875264

22485

ENSAPLT00000044842

11852766 - 11875264

22499

ENSAPLT00000034832

11852766 - 11879626

26861