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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11873459_11879555_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11873459 - 11879555

Intron Length:

6097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGTCA

5'SS Class:

major

3'SS Sequence:

TGCAAGCAGAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGCAAA

U12 Branch Point Sequence:

AGGTTGCAAACG

Flanking Amino Acid:

KALRQTLLEKAYFRMKTPCV

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

0.9

67.1

34.1

Major BPS

52.6

0.06

1.4

62.7

41.6

Major PPT

45.3

-0.2

1.2

37.2

38.8

Minor 5ss

37.7

-1.4

3.1

47.4

48.2

Minor BPS

37.6

-1

2.4

42.36

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034832

11852766 - 11879626

26861