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Intron Name: Anas_platyrhynchos_platyrhynchos_21_11910222_11946989_F

Intron Information:

Intron Rank:

123338

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11910222 - 11946989

Intron Length:

36768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTATGTATA

5'SS Class:

weak_major

3'SS Sequence:

TTGTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

70.6

41.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

88.8

0.87

0.7

88.9

28.2

Minor 5ss

46.3

-0.4

2.5

54.9

42.7

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016501

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034558

11910147 - 11947170

37024