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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12076906_12077024_F

Intron Information:

Intron Rank:

136293

Intron Class:

major

Intron Phase:

Intron Coordinates:

12076906 - 12077024

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTCATGTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.8

34.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.3

0.77

0.8

80.4

30.4

Minor 5ss

28.9

-2.4

3.6

40.1

46.3

Minor BPS

49.5

0.04

2.1

75.09

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023433

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040105

12076736 - 12077786

1051