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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12260128_12260220_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12260128 - 12260220

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACCCTG

5'SS Class:

weak_major

3'SS Sequence:

CTATTCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTCTATT

Flanking Amino Acid:

WKNKDWTPDNGEPCAHPNSR

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

56.3

48.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.4

0.62

0.9

72.2

37.7

Minor 5ss

47.2

-0.3

2.9

43.8

Minor BPS

49.5

0.05

77.01

39.6

Associated Gene:

Gene:

PCK1

Ensembl Gene ID:

ENSAPLG00000002914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002967

12257438 - 12264908

7471