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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12345534_12355884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12345534 - 12355884

Intron Length:

10351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TTTGCCTCCACA

Flanking Amino Acid:

LHPAFIQRPFGLTPHYVYPQ

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

78.9

0.65

0.8

72.8

32.1

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

56.7

0.21

2.1

75.44

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041867

12345233 - 12358123

12891