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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12355940_12357111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12355940 - 12357111

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TTTTTCTGAACC

Flanking Amino Acid:

ADGQIPGIRLRFTIGVQQLH

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.3

66.9

40.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

85.3

0.79

0.6

84.7

23.2

Minor 5ss

35.5

-1.6

3.2

45.6

36.6

Minor BPS

79.3

0.9

1.3

87.1

29.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041867

12345233 - 12358123

12891