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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12376206_12376722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12376206 - 12376722

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TAATCTTACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TGTTTTATAATC

Flanking Amino Acid:

LPERCYCADVVHPMAAVATA

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.6

41.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

0.36

0.9

59.2

41.5

Minor 5ss

39.7

-1.2

3.2

53.4

44.8

Minor BPS

61.1

0.33

1.5

71.34

33.8

Associated Gene:

Gene:

RAE1

Ensembl Gene ID:

ENSAPLG00000003160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003249

12376053 - 12385345

9293