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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12379070_12379915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12379070 - 12379915

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATATTCTAATA

Flanking Amino Acid:

FLIAGSWANDVRCWEVQDNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.8

0.69

0.8

72.3

37.7

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

52.8

0.08

1.6

65.44

34.8

Associated Gene:

Gene:

RAE1

Ensembl Gene ID:

ENSAPLG00000003160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003249

12376053 - 12385345

9293