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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12386993_12389519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12386993 - 12389519

Intron Length:

2527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATCTG

5'SS Class:

major

3'SS Sequence:

TTCTCCAACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TATTCTCCAACC

Flanking Amino Acid:

VFTLMDADPHGIEIMCIYKY

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.8

43.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

66.6

0.37

0.9

59.7

35.8

Minor 5ss

37.3

-1.4

3.1

46.6

43.1

Minor BPS

57.4

0.21

1.9

72.89

37.7

Associated Gene:

Gene:

SPO11

Ensembl Gene ID:

ENSAPLG00000003492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003562

12383798 - 12398897

15100