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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12389620_12390109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12389620 - 12390109

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGCAAC

5'SS Class:

major

3'SS Sequence:

TTTATTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTATTT

Flanking Amino Acid:

IKLSPCIMITGRGIPDLNTR

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.3

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.7

81.6

30.2

Minor 5ss

46.2

-0.4

2.6

60.9

43.9

Minor BPS

61.8

0.45

1.6

79.69

Associated Gene:

Gene:

SPO11

Ensembl Gene ID:

ENSAPLG00000003492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003562

12383798 - 12398897

15100