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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12390220_12390441_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

12390220 - 12390441

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CTTAACATAAAAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GTAGCCTTAACA

Flanking Amino Acid:

TVPSNVQGIKNLNSHAKFIL

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

65.1

41.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

54.4

0.1

1.1

Minor 5ss

95.8

1.54

0.7

90.3

20.6

Minor BPS

75.1

0.78

1.4

77.27

39.3

Associated Gene:

Gene:

SPO11

Ensembl Gene ID:

ENSAPLG00000003492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003562

12383798 - 12398897

15100