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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12392562_12392784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12392562 - 12392784

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGTG

5'SS Class:

major

3'SS Sequence:

TTTGTCTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTGTCTTGATA

Flanking Amino Acid:

MVQSDTYATKRDIYYSDTQL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

69.9

41.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

75.5

0.57

72.9

37.5

Minor 5ss

39.6

-1.2

3.5

55.7

48.5

Minor BPS

69.5

0.61

1.3

77.25

33.8

Associated Gene:

Gene:

SPO11

Ensembl Gene ID:

ENSAPLG00000003492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003562

12383798 - 12398897

15100