Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_1260064_1261186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1260064 - 1261186

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTATTTTAAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTTATTTTAAAG

Flanking Amino Acid:

DVKRPSSSKSLGQLWEGWEG

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

59.1

42.4

Major BPS

71.6

0.54

33.1

Major PPT

81.2

0.7

82.5

32.7

Minor 5ss

37.1

-1.5

2.9

50.1

46.1

Minor BPS

63.9

0.3

1.5

68.85

38.6

Associated Gene:

Gene:

SULF2

Ensembl Gene ID:

ENSAPLG00000009910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040305

1196878 - 1261997

65120

ENSAPLT00000028490

1150893 - 1261834

110942

ENSAPLT00000010385

1159516 - 1261738

102223