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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1266494_1267431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1266494 - 1267431

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTACA

Flanking Amino Acid:

MSGMPMGPDQKYC*

Intron Amino Acid Position:

1365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

95.6

1.03

0.5

91.4

20.1

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

77.6

0.86

1.5

87.29

30.4

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189