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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1267574_1268124_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1267574 - 1268124

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGTCATTTTATT

Flanking Amino Acid:

GWPSGSMTRSSSFPQQQFSH

Intron Amino Acid Position:

1317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.1

0.68

0.9

37.3

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

49.8

0.06

1.8

71.17

39.5

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189