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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1268300_1268517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1268300 - 1268517

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACTAGTA

5'SS Class:

major

3'SS Sequence:

TTTGTCTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

GTGATGATAACT

Flanking Amino Acid:

PQQFSYPPNYGITQQPDPAF

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

60.9

37.9

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

80.8

0.69

36.6

Minor 5ss

33.1

-1.9

3.6

44.3

45.3

Minor BPS

45.4

-0.2

2.3

44.3

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010262

1266482 - 1291670

25189

ENSAPLT00000029889

1265850 - 1291670

25821