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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1268744_1269223_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1268744 - 1269223

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGGGGATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTTTTCTAATA

Flanking Amino Acid:

PVMQPQVASQQQGFLNAQMV

Intron Amino Acid Position:

1184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

53.5

0.08

1.2

49.1

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

62.1

0.38

1.6

73.69

31.8

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189