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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1269326_1270431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1269326 - 1270431

Intron Length:

1106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTTCTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GTATTTTCAAGC

Flanking Amino Acid:

QLQQRLQGQQFMNQTRQALE

Intron Amino Acid Position:

1150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

80.7

34.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

73.8

0.54

32.6

Minor 5ss

49.9

-0

2.8

73.7

42.8

Minor BPS

48.9

-0.1

1.8

59.58

39.6

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189