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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1270729_1271278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1270729 - 1271278

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAGG

5'SS Class:

major

3'SS Sequence:

ACGTCTCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TGTGTTTTACGT

Flanking Amino Acid:

ALGIPDLVNQGQALEAKQDS

Intron Amino Acid Position:

1051

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

69.2

41.7

Major BPS

68.8

0.47

1.2

63.4

Major PPT

64.8

0.33

1.1

64.3

36.3

Minor 5ss

34.6

-1.8

2.9

39.2

Minor BPS

47.7

-0.1

67.13

44.4

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189