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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12719449_12721328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12719449 - 12721328

Intron Length:

1880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAA

U12 Branch Point Sequence:

TGTGTCTTACAG

Flanking Amino Acid:

ANRKNMLLAAKQICKEFTDL

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

60.9

0.27

1.3

64.3

39.6

Major PPT

82.8

0.74

0.9

76.5

37.7

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

48.6

-0.2

1.9

56.62

44.8

Associated Gene:

Gene:

TFAP2C

Ensembl Gene ID:

ENSAPLG00000017261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042241

12718678 - 12726974

8297

ENSAPLT00000029004

12718678 - 12726021

7344