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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12721471_12722815_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12721471 - 12722815

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCACGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

CATTTAATAACT

Flanking Amino Acid:

NVTLLTSLVEGEAVHLARDF

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.8

38.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

59.4

0.21

51.3

Minor 5ss

35.6

-1.6

50.5

45.8

Minor BPS

54.1

0.21

1.9

75.11

41.1

Associated Gene:

Gene:

TFAP2C

Ensembl Gene ID:

ENSAPLG00000017261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029004

12718678 - 12726021

7344

ENSAPLT00000042241

12718678 - 12726974

8297