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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12722935_12723658_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12722935 - 12723658

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

TCCCTAATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTTTCCCTAATT

Flanking Amino Acid:

NASLLGGVLRRAKSKNGGRS

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

0.3

62.3

30.4

Major PPT

76.1

0.59

0.9

69.1

34.7

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

80.3

1.03

1.5

96.93

27.7

Associated Gene:

Gene:

TFAP2C

Ensembl Gene ID:

ENSAPLG00000017261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029004

12718678 - 12726021

7344

ENSAPLT00000042241

12718678 - 12726974

8297