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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12723882_12725090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12723882 - 12725090

Intron Length:

1209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGAG

5'SS Class:

major

3'SS Sequence:

TTCCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

CTTCCCTAAAAA

Flanking Amino Acid:

LMHDQTVIRKGPISLTKNSA

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.3

72.3

39.5

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

82.5

0.73

0.7

77.1

24.9

Minor 5ss

27.4

-2.6

2.9

31.5

42.8

Minor BPS

58.1

0.25

1.8

70.09

41.9

Associated Gene:

Gene:

TFAP2C

Ensembl Gene ID:

ENSAPLG00000017261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042241

12718678 - 12726974

8297

ENSAPLT00000029004

12718678 - 12726021

7344