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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1273077_1275494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1273077 - 1275494

Intron Length:

2418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTTGA

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

TTTTCTTTATAG

Flanking Amino Acid:

ENQENFGANLVSAPNRSVAM

Intron Amino Acid Position:

871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.8

38.4

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

88.2

0.86

0.6

24.2

Minor 5ss

-0.9

2.4

50.7

45.6

Minor BPS

0.3

1.8

72.46

40.4

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189