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Intron Name: Anas_platyrhynchos_platyrhynchos_21_12753198_12753561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12753198 - 12753561

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCATACAAA

5'SS Class:

major

3'SS Sequence:

TTTGTTCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ATTTACACAACT

Flanking Amino Acid:

SIADSEEKSELDAVVPGHSV

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.2

60.1

40.4

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

83.3

0.75

0.8

81.6

30.5

Minor 5ss

33.8

-1.8

3.9

47.6

48.1

Minor BPS

55.4

0.25

81.45

39.2

Associated Gene:

Gene:

RTF2

Ensembl Gene ID:

ENSAPLG00000022166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034320

12752450 - 12777014

24565