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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1275684_1276754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1275684 - 1276754

Intron Length:

1071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

AATTCTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

QALFQGNAPLSMRNPQSVQP

Intron Amino Acid Position:

808

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

74.4

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.1

0.5

38.4

Minor 5ss

36.4

-1.5

3.1

46.1

42.9

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

NCOA3

Ensembl Gene ID:

ENSAPLG00000009790

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029889

1265850 - 1291670

25821

ENSAPLT00000010262

1266482 - 1291670

25189